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Analysis Results
Getting Started
Welcome to Single Cell Browser! Here's how to get started:
- Browse available datasets on the Home page
- Click a dataset to view its clusters, markers, and sample composition
- Open the Feature Plot to visualize a gene's expression on the UMAP
- Explore the Plotting, Comparisons, and Analysis menus for more tools
Feature Plot
To plot a gene's expression:
- Select a dataset from the dropdown menu
- Enter a gene symbol (case-sensitive:
Genefor mouse,GENEfor human) - Adjust plot options as needed
- Click "Plot" to generate the visualization
Enrichment Analysis
For GO, KEGG, or GSEA analysis:
- Provide a gene list, or select a file of differentially expressed genes
- Set the analysis parameters
- Submit and view results in the Results tab
Tips
- Use split plots to compare expression across conditions or metadata fields
- Try the co-expression plot to visualize two genes at once
- Use the Comparisons tools to line datasets up side by side
- Click help icons (?) for additional information on specific features
Need More Help?
If you need further assistance, please contact us.